Others titles

Entres Pubmed
Pubmed Research Papers
MEDLINE/PubMed Data
MEDLINE/PubMed Baseline
MEDLINE/PubMed XML

Keywords

Pubmed Journals
NCBI Pubmed
Medline Search
Pubmed Citation
Medline Articles
MESH Terminology

MEDLINE PubMed Journal Citation Database

Name: MEDLINE PubMed Journal Citation Database
Creator: John Snow Labs

This dataset contains NLM’s database of citations and abstracts in the fields of medicine, nursing, dentistry, veterinary medicine, health care systems, and preclinical sciences.

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Description

MEDLINE is the U.S. National Library of Medicine® (NLM) premier bibliographic database that contains more than 23 million references to journal articles in life sciences with a concentration on biomedicine. A distinctive feature of MEDLINE is that the records are indexed with NLM Medical Subject Headings (MeSH®)

The subject scope of MEDLINE is biomedicine and health, broadly defined to encompass those areas of the life sciences, behavioral sciences, chemical sciences, and bioengineering needed by health professionals and others engaged in basic research and clinical care, public health, health policy development, or related educational activities. MEDLINE also covers life sciences vital to biomedical practitioners, researchers, and educators, including aspects of biology, environmental science, marine biology, plant and animal science as well as biophysics and chemistry. Publishers submit journals to an NIH-chartered advisory committee, the Literature Selection Technical Review Committee (LSTRC), which reviews and recommends journals for MEDLINE. The LSTRC considers the quality of the scientific content of a journal, including originality and the importance of the content for the MEDLINE global audience, using the guidelines found on the NLM Fact Sheet MEDLINE Journal Selection.

MEDLINE is the primary component of PubMed®, part of the Entrez series of databases provided by the NLM National Center for Biotechnology Information (NCBI). In addition to MEDLINE citations, PubMed also contains:
– In-process citations that provide a record for an article before it is indexed with MeSH® and added to MEDLINE or converted to out-of-scope status.
– Citations that precede the date that a journal was selected for MEDLINE indexing.
– Some OLDMEDLINE citations that have not yet been updated with current vocabulary and converted to MEDLINE status.
– Citations to articles that are out-of-scope (e.g., covering plate tectonics or astrophysics) from certain MEDLINE journals, primarily general science and general chemistry journals, for which the life sciences articles are indexed with MeSH for MEDLINE.
– Citations to some additional life science journals that submit full-text articles to PMC® (PubMed Central®) and receive a qualitative review by NLM.
– Citations for the majority of books and book chapters available on the NCBI Bookshelf.

MedlineCitation Status attribute

1. In-Data-Review
Records submitted to NLM electronically by publishers are added to PubMed at NLM and given in In-Data-Review status. Records in this status have undergone review at the journal issue level; i.e., the journal title, date of publication and volume/issue elements (referred to as the source data) are checked. They are not yet MEDLINE records because they have not undergone complete quality review and MeSH indexing; thus they should not be identified as MEDLINE records.

2. In-Process
Records in this status have undergone a citation level review; i.e., the author names, article title, and pagination are checked. All In-Data-Review records that entered the workflow via publisher electronic submission are redistributed again in In-Process status whether or not they were revised as a result of the second citation level review, and are not identified in any way as having been revised or not having been revised. Records created via NLM current other data entry mechanism, scanning/optical character recognition (OCR), are distributed for the first time in In-Process status after their creation. They are not yet MEDLINE records because they have not undergone complete quality review and MeSH indexing; thus they should not be identified as MEDLINE records. Most in-process records are eventually indexed with MeSH Headings and are elevated to completed MEDLINE status. However, some are determined to be out of scope (e.g., articles on plate tectonics or astrophysics from certain MEDLINE journals, primarily general science and chemistry journals, for which the life sciences articles are indexed for MEDLINE) and are not elevated to MEDLINE status; instead they become PubMed-not-Medline final status records. In rare cases the records are deleted and do not become PubMed-not-MEDLINE records.

3. MEDLINE
In-process records undergo rigorous quality assurance routines before they are elevated to MEDLINE status or to PubMed-not-MEDLINE status. Records in MEDLINE status are the only ‘true’ MEDLINE records .

4. OLDMEDLINE
A small percentage of the records in the OLDMEDLINE subset are in MedlineCitation Status = OLDMEDLINE. The criterion for records to be in OLDMEDLINE status is that all the original MeSH Headings have not yet been mapped to current MeSH. NLM exports both new and revised OLDMEDLINE records on an irregular and infrequent basis.

5. PubMed-not-MEDLINE
Records in this status are from journals included in MEDLINE and have undergone quality review but are not assigned MeSH headings because the cited item is not in scope for MEDLINE either by topic or by date of publication, or from non-MEDLINE journals and have undergone quality review.

6. Publisher
Records in Publisher status are not distributed via bulk download. At this time approximately 98% of PubMed’s content is distributed via bulk download. At any given time, there are between 400,000 to 500,000 additional records in Publisher MedlineCitation Status in PubMed. These are citations to author manuscripts of articles published by NIH-funded researchers and citations to books in the NCBI Bookshelf etc.

Citation Subset
The values and their definitions for Citation Subset are as follows. Note that several are closed subsets no longer being assigned.
AIM = citations from Abridged Index Medicus journals, a list of about 120 core clinical, English language journals.
B = citations from non-Index Medicus journals in the field of biotechnology (not currently used).
C = citations from non-Index Medicus journals in the field of communication disorders (not currently used).
D = citations from dental journals.
E = citations in the field of bioethics (includes records from the former BIOETHICS database).
F = older citations from one journal prior to its selection for Index Medicus; used to augment the database for NLM International MEDLARS Centers (not currently used).
H = citations from non-Index Medicus journals in the field of health administration (includes records from the former HealthSTAR database).
IM = citations from Index Medicus journals.
J = citations in the field of population information (not currently used; on records from the former POPLINE® database).
K = citations from non-Index Medicus journals relating to consumer health.
N = citations from nursing journals.
OM = pre-1966 citations from the older print indices of the Cumulated Index Medicus (CIM) and the Current List of Medical Literature (CLML).
Q = citations in the field of the history of medicine (includes records from the former HISTLINE® database).
QIS = citations from non-Index Medicus journals in the field of the history of medicine. (For NLM use effective in late 2006 because they require special handling at NLM; not a subset of Q; some journals previously designated as Q are now QIS.)
QO is subset of Q – indicates older history of medicine journal citations that were created before the former HISTLINE file was converted to a MEDLINE-like format. (For NLM use because they require special handling at NLM.)
R = citations from non-Index Medicus journals in the field of population and reproduction (not currently used).
S = citations in the field of space life sciences (includes records from the former SPACELINE™ database).
T = citations from non-Index Medicus journals in the field of health technology assessment (includes records from the former HealthSTAR database).
X = citations in the field of AIDS/HIV (includes records from the former AIDSLINE® database).

About this Dataset

Data Info

Date Created	1971
Last Modified	2020-09-25
Version	2020-09-25
Update Frequency	Daily
Temporal Coverage	1946 to 2018
Spatial Coverage	World
Source	John Snow Labs; National Library of Medicine (NLM);
Source License URL
Source License Requirements	N/A
Source Citation	N/A
Keywords	Pubmed Journals, NCBI Pubmed, Medline Search, Pubmed Citation, Medline Articles, MESH Terminology
Other Titles	Entres Pubmed, Pubmed Research Papers, MEDLINE/PubMed Data, MEDLINE/PubMed Baseline, MEDLINE/PubMed XML

Data Fields

Name	Description	Type	Constraints
PubMed_ID	The PubMed unique identifier, is a 1 to 8-digit accession number with no leading zeros.	integer	required : 1level : Nominal
PubMed_Version	Used to accommodate the model of publishing known as "versioning"	integer	required : 1level : Interval
Citation_Status	Indicates the stage of a citation.	string	required : 1enum : Array ( [0] => In-Process [1] => PubMed-not-MEDLINE [2] => In-Data-Review [3] => Publisher [4] => MEDLINE [5] => OLDMEDLINE )
Citation_Owner	Indicates the The party responsible for creating and validating the citation. Each citation has only one MedlineCitation Owner	string	required : 1enum : Array ( [0] => NLM [1] => NASA [2] => PIP [3] => KIE [4] => HSR [5] => HMD [6] => SIS [7] => NOTNLM )
Citation_VersionID	Used with “versioned” citations	string	-
Citation_Version_Date	Used with “versioned” citations	date	-
Citation_Indexing_Method	Indexing method used for citation	string	-
Citation_Record_Completed_Date	Date processing of the record ends i.e., MeSH Headings have been added, quality assurance validations are completed, and the completed record subsequently is distributed to PubMed.	date	-
Citation_Record_Revised_Date	May reside on records with Status = MEDLINE, OLDMEDLINE, and PubMed-not-MEDLINE. It identifies the date a change is made to a record in one of those statuses, either as a result of individual or global maintenance.	date	-
Citation_Other_SourceID	identifies a.) the organization responsible for the information on the citation or the document where the information originated, and b.) a unique number for that citation or document.	string	-
Citation_Other_Abstract_Text	Indicates the abstract created by a collaborating partner or other entity	string	-
Citation_Other_Abstract_Text_Type	Type of Other Abstract	string	-
Citation_Other_Abstract_Text_Language	Indicate on behalf of publishers that there are additional abstracts available at the publishers' Web sites or elsewhere.	string	-
Citation_Other_Abstract_Text_Copyright_Info	Indicate copyright statement provided by the publisher of the journal	string	-
Citation_Mesh_Headings_List	NLM controlled vocabulary, Medical Subject Headings (MeSH®), is used to characterize the content of the articles represented by MEDLINE citations	string	-
Citation_Chemical_Drug_List	Contains one or more chemicals or drugs,which are displayed as registry number and name of substance.	string	-
Citation_Protocol_Disease_List	Indicates Protocol Class 2 Supplementary Concept Record (SCR) terms and Disease Class 3 SCR terms	string	-
Citation_Keywords_List	Contains controlled terms that describe the content of the article.	string	-
Citation_Number_Of_References	Contains the number of bibliographic references listed in the article.	integer	level : Ratio
Citation_Subset	identifies the subset for which MEDLINE records from certain journal lists or records on specialized topics were created. Some of these values are found on extremely small numbers of records.	string	-
Citation_Comments_Corrections	These data pertain to and contain citations to associated journal publications, e.g., comments, errata, retractions, or cited references, and enable outside links between the record at hand to its associated citation(s).	string	-
Citation_Gene_Symbol_List	Contains the "symbol" or abbreviated form of gene names as reported in the literature.	string	-
Citation_Personal_Name_Subject_List	Used for citations that contain a biographical note or obituary, or are entirely about the life or work of an individual or individuals.	string	-
Citation_Space_Flight_Mission	Contains the space flight mission name and/or number when results of research conducted in space are covered in a publication.	string	-
Citation_Investigator_List	Contain personal names of individuals (e.g., collaborators and investigators) who are not authors of a paper but rather are listed in the paper as members of a collective/corporate group that is an author of the paper.	string	-
Citation_General_Note	Contains supplemental or descriptive information related to the document cited in the MEDLINE record. It is a 'catchall' for various types of information included by NLM collaborating producers or by NLM.	string	-
Citation_Conflict_Of_Interest_Statement	Conflict of interest statement	string	-
Journal_ISSN	ISSN (International Standard Serial Number) is always an eight-character value that uniquely identifies the cited journal. It is nine characters long in the hyphenated form: XXXX-XXXX.	string	-
Journal_ISSN_Type	Indicates which of the ISSNs assigned to the journal is recorded in the citation.	string	enum : Array ( [0] => Electronic [1] => Print [2] => Undetermined )
Journal_Title	The full journal title	string	required : 1
Journal_Title_ISO_Abbreviation	ISO Abbreviations are constructed at NLM to assist NCBI in linking from GenBank to PubMed. ISO Abbreviations created after 2007 are identical to the NLM title abbreviations.	string	-
Journal_Cited_Medium	Indicates whether a citation is processed/indexed at NLM from the online or the print version of the journal.	string	enum : Array ( [0] => Internet [1] => Print )
Journal_Volume_Issue	The volume number and the issue (part or supplement) of the journal in which the article was published.	string	-
Journal_Published_Date	Contains the full date on which the issue of the journal was published	string	-
Journal_Published_Country	Contains the place of publication of the journal.	string	-
Journal_Title_Standard_Abbreviation	Contains the standard abbreviation for the title of the journal in which an article appeared.	string	-
Journal_NLM_ID	It may appear as seven, eight or nine charcaters and is the preferred element to use when looking for the serial record for the journal in which the article was published.	string	required : 1
Journal_ISSN_Linking	Contains the ISSN designated by the ISSN Network to enable co-location or linking among the different media versions of a continuing resource	string	-
Article_Title	Contains the entire title of the journal article.It is always in English; those titles originally published in a non-English language and translated are enclosed in square brackets.	string	-
Article_Authors	Contains the Personal and collective (corporate) author names published with the article.It includes author's lastname, forename, suffix, collective (corporate) names and affliation information	string	-
Article_Language	Contains the The language in which an article was published.	string	required : 1
Article_Publish_Model	Identify the medium/media in which the cited article is published.	string	required : 1enum : Array ( [0] => Print [1] => Print-Electronic [2] => Electronic [3] => Electronic-Print [4] => Electronic-eCollection )
Article_Abstract_Text	English-language abstracts taken directly from the published article. Abstracts in records may be truncated.	string	-
Article_Abstract_Text_Copyright_Info	Contains a copyright statement provided by the publisher of the journal and appears only on records supplied electronically to NLM by the publisher.	string	-
Article_Publication_Types	It identifies the type of article indexed for MEDLINE; it characterizes the nature of the information or the manner in which it is conveyed as well as the type of research support received (e.g., Review, Letter, Retracted Publication, Clinical Conference, Research Support, N.I.H., Extramural).	string	required : 1
Article_Pagination	Indicates the inclusive pages for the article cited.	string	-
Article_ELocationID	Provides an electronic location for items which lack standard page numbers. The element houses Digital Object Identifiers (DOIs) or Publisher Item Identifiers (PIIs) that are provided by publishers for new citations submitted to NLM for inclusion in MEDLINE/PubMed.	string	-
Article_DataBank_List	Contains information pertaining to the registration of several types of data: 1) molecular sequence data; 2) clinical trial numbers; 3) gene expression/molecular abundance data; 4) PubChem identifiers; 5)Two general research databanks, the Dryad Digital Repository and figshare; and 6) BioProject identifiers.	string	-
Article_Grant_List	Contains following information 1) research grant or contract number 2) grant acronym 3) institute acronym followed by the agency's hierarchical structure from lower to higher entity or agency name 4) country of the granting agency	string	-
Article_Vernacular_Title	Used for articles published in non-English languages and contains the original, untranslated title.	string	-
Article_Electronic_Published_Date	Contains the date the publisher made an electronic version of the article	date	-
PubMed_History	Changes in the pubmed records, along with the status and the dates when it was changed	string	-
PubMed_Publication_Status	Publication status of the record	string	-
PubMed_ArticleID_List	List of article ids and types	string	-

Data Preview

PubMed ID

PubMed Version

Citation Status

Citation Owner

Citation VersionID

Citation Version Date

Citation Indexing Method

Citation Record Completed Date

Citation Record Revised Date

Citation Other SourceID

Citation Other Abstract Text

Citation Other Abstract Text Type

Citation Other Abstract Text Language

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30525344

Publisher

NLM

2018-12-11

Owner:NOTNLM MajorTopic Generalized arterial calcification;MajorTopic infant;MajorTopic treatment;MajorTopic magnesium;MajorTopic etidronate

1308-5735

Electronic

Journal of clinical research in pediatric endocrinology

J Clin Res Pediatr Endocrinol

Internet

;

2018-12-11

Turkey

J Clin Res Pediatr Endocrinol

101519456

Magnesium and anti-phosphate treatment with bisphosphonates for Generalised Arterial Calcification of Infancy: a case report

Dursun Fatma Department of Pediatric Endocrinology, Umraniye Training and Research Hospital, Istanbul, Turkey;Atasoy ÃztÃ¼rk TÃ¼lay Department of Radiology, Umraniye Training and Research Hospital, Istanbul, Turkey;GÃ¼ven SerÃ§in Department of Pediatric Nephrology, Umraniye Training and Research Hospital, Istanbul, Turkey;KÄ±rmÄ±zÄ±bekmez Heves Department of Pediatric Endocrinology, Umraniye Training and Research Hospital, Istanbul, Turkey;Seymen Karabulut GÃ¼lcan Department of Pediatric Endocrinology, Umraniye Training and Research Hospital, Istanbul, Turkey;KalÄ±n SevinÃ§ Department of Radiology, Umraniye Training and Research Hospital, Istanbul, Turkey;SÃ¶zeri BetÃ¼l Department of Pediatric Rheumatology, SBU. Umraniye Training and Research Hospital, Istanbul, Turkey

eng

Print-Electronic

Generalized arterial calcification of infancy (GACI) is a rare autosomal- recessive disorder characterized by calcification of the internal elastic lamina, fibrotic myointimal proliferation of muscular arteries, and resultant arterial stenosis. Treatment with bisphosphonates has been proposed as a means of reducing arterial calcifications in GACI patients, although there is no formalized treatment approach. The case reported here is a patient with severe GACI diagnosed at 3 months of age who had no response to bisphosphonate treatment, but clinically improved after the initiation of magnesium and anti-phosphate (calcium carbonate) treatments. In patients unresponsive to bisphosphonate, magnesium and anti-phosphate treatment can be attempted.

D016428 Journal Article

doi 10.4274/jcrpe.0204

pubmed 2018-12-12 6:0;medline 2018-12-12 6:0;entrez 2018-12-12 6:0

aheadofprint

pubmed 30525344;doi 10.4274/jcrpe.0204

30525344

Publisher

NLM

2018-12-17

Owner:NOTNLM MajorTopic Generalized arterial calcification;MajorTopic infant;MajorTopic treatment;MajorTopic magnesium;MajorTopic etidronate

1308-5735

Electronic

Journal of clinical research in pediatric endocrinology

J Clin Res Pediatr Endocrinol

Internet

;

2018-Dec-11

Turkey

J Clin Res Pediatr Endocrinol

101519456

Magnesium and anti-phosphate treatment with bisphosphonates for Generalised Arterial Calcification of Infancy: a case report

eng

Print-Electronic

D016428 Journal Article

doi 10.4274/jcrpe.0204

pubmed 2018-12-12 6:0;medline 2018-12-12 6:0;entrez 2018-12-12 6:0

aheadofprint

pubmed 30525344;doi 10.4274/jcrpe.0204

30525345

Publisher

NLM

2018-12-17

1308-5263

Electronic

Turkish journal of haematology : official journal of Turkish Society of Haematology

Turk J Haematol

Internet

;

2018-Dec-11

Turkey

Turk J Haematol

9606065

1300-7777

WITHDRAWN: Fok1 and Col1A1 Gene Polymorphisms and Development of Treatment-Related Bone Complications in Children with Acute Lymphoblastic Leukemia: focus on molecular change

Mungmunpuntipantip Rujittika 26 Medical Center, Bangkok Thailand;Wiwanitkit Viroj Honorary professor, dr DY Patil University, Pune, India; visiting professor, Hainan Medical University, China

eng

Print-Electronic

Ahead of Print article withdrawn by Editor.

D016428 Journal Article

doi 10.4274/tjh.2018.0424

pubmed 2018-12-12 6:0;medline 2018-12-12 6:0;entrez 2018-12-12 6:0

aheadofprint

pubmed 30525345;doi 10.4274/tjh.2018.0424

30525345

Publisher

NLM

2018-12-11

1308-5263

Electronic

Turkish journal of haematology : official journal of Turkish Society of Haematology

Turk J Haematol

Internet

;

2018-12-11

Turkey

Turk J Haematol

9606065

1300-7777

WITHDRAWN: Fok1 and Col1A1 Gene Polymorphisms and Development of Treatment-Related Bone Complications in Children with Acute Lymphoblastic Leukemia: focus on molecular change

Mungmunpuntipantip Rujittika 26 Medical Center, Bangkok Thailand;Wiwanitkit Viroj Honorary professor, dr DY Patil University, Pune, India; visiting professor, Hainan Medical University, China

eng

Print-Electronic

Ahead of Print article withdrawn by Editor.

D016428 Journal Article

doi 10.4274/tjh.2018.0424

pubmed 2018-12-12 6:0;medline 2018-12-12 6:0;entrez 2018-12-12 6:0

aheadofprint

pubmed 30525345;doi 10.4274/tjh.2018.0424

30525346

PubMed-not-MEDLINE

NLM

2018-12-17

1559-3908

Electronic

Emergency medicine practice

Emerg Med Pract

Internet

20;Suppl 12

2018-Dec-01

United States

Emerg Med Pract

100889097

1524-1971

Points & Pearls: Influenza: diagnosis and management in the emergency department

Giwa Al Assistant Professor of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, NY;Ogedegbe Chinwe Associate Professor of Emergency Medicine, Seton Hall School of Medicine, Nutley, NJ; Associate Professor of Emergency Medicine, Rutgers-New Jersey Medical School, Newark, NJ;Murphy Charles G. Department of Emergency Medicine, Metrowest Medical Center, Framingham, MA;Gupta Nachi Department of Emergency Medicine, Icahn School of Medicine at Mount Sinai, New York, NY;Nusbaum Jeffrey EMS Fellow, University of Pittsburgh Medical Center, Pittsburgh, PA

eng

Electronic

Emergency clinicians must be aware of the current diagnostic and therapeutic recommendations for influenza and the available resources to guide management. This comprehensive review outlines the classification of influenza viruses, influenza pathophysiology, the identification of high-risk patients, and the importance of vaccination. Seasonal variations of influenza are discussed, as well as the rationale for limiting testing during periods of high prevalence. Differences between strains of influenza are discussed, as well as the challenges in achieving optimal vaccine effectiveness. Recommendations for use of the currently available oral, intranasal, and intravenous antiviral treatments are provided, as well as utilizing shared decision-making with patients regarding risks and benefits of treatment. [Points & Pearls is a digest of Emergency Medicine Practice]

D016428 Journal Article

1-2

received 2018-11-01;accepted 2018-11-12;pubmed 2018-12-12 6:0;medline 2018-12-12 6:1;entrez 2018-12-12 6:0

epublish

pubmed 30525346;pii 591

30525346

PubMed-not-MEDLINE

NLM

2018-12-11

1559-3908

Electronic

Emergency medicine practice

Emerg Med Pract

Internet

20;Suppl 12

2018-12-01

United States

Emerg Med Pract

100889097

1524-1971

Points & Pearls: Influenza: diagnosis and management in the emergency department

eng

Electronic

D016428 Journal Article

1-2

received 2018-11-01;accepted 2018-11-12;pubmed 2018-12-12 6:0;medline 2018-12-12 6:0;entrez 2018-12-12 6:0

epublish

pubmed 30525346;pii 591

30525347

PubMed-not-MEDLINE

NLM

2018-12-15

Owner:NOTNLM MajorTopic lipoproteins;MajorTopic Mendelian randomization analysis;MajorTopic metabolomics

RefType:Cites Int J Epidemiol. 2013 Feb;42(1):111-27 22507743 ;RefType:Cites N Engl J Med. 2016 Dec;375(22):2144-2153 27959767 ;RefType:Cites Circ Res. 2017 May 12;120(10):1537-1539 28495986 ;RefType:Cites J Am Coll Cardiol. 2013 Nov 12;62(20):1906-8 24055740 ;RefType:Cites Circ Cardiovasc Genet. 2015 Feb;8(1):192-206 25691689 ;RefType:Cites Circ Cardiovasc Genet. 2017 Dec;10(6):null 29237679 ;RefType:Cites N Engl J Med. 2017 Apr 20;376(16):1527-1539 28304242 ;RefType:Cites JAMA Cardiol. 2016 Sep 1;1(6):692-9 27487401 ;RefType:Cites Int J Epidemiol. 2013 Feb;42(1):97-110 22507742 ;RefType:Cites Nat Commun. 2016 Mar 23;7:11122 27005778 ;RefType:Cites N Engl J Med. 2017 Jul 20;377(3):211-221 28538136 ;RefType:Cites Arterioscler Thromb Vasc Biol. 2018 Jul;38(7):1644-1655 29880491 ;RefType:Cites Am J Epidemiol. 2017 Nov 1;186(9):1084-1096 29106475 ;RefType:Cites Lancet. 2017 Nov 25;390(10110):2360-2371 28941948 ;RefType:Cites Arterioscler Thromb Vasc Biol. 2017 Jan;37(1):43-48 27856457 ;RefType:Cites J Am Coll Cardiol. 2016 Mar 15;67(10):1211-1213 26965543 ;RefType:Cites Eur Heart J. 2018 Jul 14;39(27):2540-2545 29020411 ;RefType:Cites Nat Rev Cardiol. 2017 Nov;14(11):635-636 28980665 ;RefType:Cites Lancet. 2014 Aug 16;384(9943):607-617 25131980 ;RefType:Cites Nat Genet. 2012 Jan 29;44(3):269-76 22286219 ;RefType:Cites Eur Heart J. 2018 Jul 14;39(27):2546-2550 29236976 ;RefType:Cites J Am Heart Assoc. 2015 Nov 19;4(11):null 26586732 ;RefType:Cites J Am Heart Assoc. 2017 Jul 21;6(7):null 28733430 ;RefType:Cites Am J Cardiol. 2018 Feb 1;121(3):308-314 29221604 ;RefType:Cites N Engl J Med. 2015 Apr 16;372(16):1489-99 25773378 ;RefType:Cites J Am Coll Cardiol. 2016 Mar 15;67(10):1200-1210 26965542 ;RefType:Cites J Am Heart Assoc. 2017 Dec 9;6(12):null 29223956 ;RefType:Cites Lancet. 2015 Jan 24;385(9965):351-61 25262344 ;RefType:Cites Proc Natl Acad Sci U S A. 2013 Jan 29;110(5):1917-22 23277558 ;RefType:Cites Diabetes Care. 2016 May;39(5):833-46 27208380 ;RefType:Cites Lancet. 2014 Aug 16;384(9943):626-635 25131982 ;RefType:Cites N Engl J Med. 2006 Mar 23;354(12):1264-72 16554528 ;RefType:Cites Arterioscler Thromb Vasc Biol. 2005 Aug;25(8):1678-83 15879301 ;RefType:Cites Lancet. 2002 Nov 23;360(9346):1623-30 12457784 ;RefType:Cites N Engl J Med. 2015 Apr 16;372(16):1500-9 25773607 ;RefType:Cites Lancet. 2012 Aug 11;380(9841):581-90 22607822 ;RefType:Cites Circulation. 2015 Mar 3;131(9):774-85 25573147 ;RefType:Cites Int J Epidemiol. 2011 Dec;40(6):1652-66 22158673 ;RefType:Cites J Am Coll Cardiol. 2010 Jun 22;55(25):2833-42 20579540 ;RefType:Cites J Am Coll Cardiol. 2018 Feb 13;71(6):620-632 29420958 ;RefType:Cites Atherosclerosis. 2018 Feb;269:159-165 29366988 ;RefType:Cites N Engl J Med. 2017 May 4;376(18):1713-1722 28304224 ;RefType:Cites Lancet. 2016 Nov 19;388(10059):2532-2561 27616593 ;RefType:Cites Nat Genet. 2009 Jan;41(1):35-46 19060910 ;RefType:Cites Lancet Diabetes Endocrinol. 2017 Feb;5(2):97-105 27908689 ;RefType:Cites Circulation. 2013 Jan 22;127(3):340-8 23258601 ;RefType:Cites Eur J Heart Fail. 2018 Apr;20(4):663-673 29226610 ;RefType:Cites Int J Epidemiol. 2003 Feb;32(1):1-22 12689998 ;RefType:Cites Cell Syst. 2015 Oct 28;1(4):293-301 27136058

1524-4539

Electronic

Circulation

Internet

138;22

2018-11-27

United States

Circulation

147763

0009-7322

Metabolomic Consequences of Genetic Inhibition of PCSK9 Compared With Statin Treatment

Sliz Eeva Center for Life Course Health Research, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Computational Medicine, Faculty of Medicine, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Kettunen Johannes Center for Life Course Health Research, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Computational Medicine, Faculty of Medicine, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Holmes Michael Medical Research Council Population Health Research Unit, University of Oxford, United Kingdom;Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, United Kingdom;National Institute for Health Research, Oxford Biomedical Research Centre,Oxford University Hospital, United Kingdom;Medical Research Council Integrative Epidemiology Unit, University of Bristol,United Kingdom;Williams Clare MRC/BHF Cardiovascular Epidemiology Unit, Department ofPublic Health and Primary Care, University of Cambridge, United Kingdom;Homerton College, University of Cambridge, United Kingdom;Boachie Charles Robertson Centre for Biostatistics, University of Glasgow, UnitedKingdom;Wang Qin Center for Life Course Health Research, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Computational Medicine, Faculty of Medicine, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Systems Epidemiology, Baker Heart and Diabetes Institute, Melbourne,Victoria, Australia;MÃ¤nnikkÃ¶ Minna Northern Finland Birth Cohorts, Faculty of Medicine, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Sebert Sylvain Center for Life Course Health Research, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Department of Genomics of Complex Diseases, School of Public Health, Imperial College London, United Kingdom;Walters Robin Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, United Kingdom;Lin Kuang Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, United Kingdom;Millwood Lona Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, United Kingdom;Clarke Robert Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, United Kingdom;Li Liming Chinese Academy of Medical Sciences, Beijing, China;Department of Global Health, School of Public Health, Peking University, Beijing, China;Rankin N Institute of Cardiovascular and Medical Sciences, University of Glasgow, United Kingdom;Welsh Paul Institute of Cardiovascular and Medical Sciences, University of Glasgow, United Kingdom;Delles Christian Institute of Cardiovascular and Medical Sciences, University of Glasgow, United Kingdom;Jukema J Center for Life Course Health Research, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Department of Cardiology, Leiden University Medical Center, The Netherlands;Trompet Stella Department of Cardiology, Leiden University Medical Center, The Netherlands;Department of Internal Medicine, Section of Gerontologyand Geriatrics, Leiden University Medical Center, The Netherlands;Ford Ian Robertson Centre for Biostatistics, University of Glasgow, UnitedKingdom;Perola Markus National Institute for Health and Welfare, Helsinki, Finland;Institute for Molecular Medicine Finland, University of Helsinki;University of Tartu, Estonian Genome Center, Estonia;Salomaa Veikko National Institute for Health and Welfare, Helsinki, Finland;JÃ¤rvelin Marjo-Riitta Department of Epidemiology and Biostatistics, MRC-PHE Centre for Environment and Health, Imperial College London, United Kingdom;Unit of Primary Care, Oulu University Hospital, Oulu, Finland;Chen Zhengming Clinical Trial Service Unit and Epidemiological Studies Unit, Nuffield Department of Population Health, University of Oxford, United Kingdom;Lawlor Debbie Medical Research Council Integrative Epidemiology Unit, University of Bristol,United Kingdom;Population Health Science, Bristol Medical School, University of Bristol,United Kingdom;Ala-Korpela Mika Center for Life Course Health Research, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Computational Medicine, Faculty of Medicine, University of Oulu,Finland. Biocenter Oulu, Oulu, Finland;Medical Research Council Integrative Epidemiology Unit, University of Bristol,United Kingdom;Population Health Science, Bristol Medical School, University of Bristol,United Kingdom;Systems Epidemiology, Baker Heart and Diabetes Institute, Melbourne,Victoria, Australia;NMR Metabolomics Laboratory, School of Pharmacy, University of Eastern Finland, Kuopio;Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Faculty of Medicine, Nursing and Health Sciences, The Alfred Hospital, Monash University, Melbourne, Victoria, Australia;Danesh John MRC/BHF Cardiovascular Epidemiology Unit, Department ofPublic Health and Primary Care, University of Cambridge, United Kingdom;National Institute for Health Research Blood and Transplant Research Unit in Donor Health and Genomics, University of Cambridge, United Kingdom;Wellcome Trust Sanger Institute, Hinxton, United Kingdom;Smith George Medical Research Council Integrative Epidemiology Unit, University of Bristol,United Kingdom;Population Health Science, Bristol Medical School, University of Bristol,United Kingdom;Sattar Naveed Institute of Cardiovascular and Medical Sciences, University of Glasgow, United Kingdom;Butterworth Adam MRC/BHF Cardiovascular Epidemiology Unit, Department ofPublic Health and Primary Care, University of Cambridge, United Kingdom;National Institute for Health Research Blood and Transplant Research Unit in Donor Health and Genomics, University of Cambridge, United Kingdom;WÃ¼rtz Peter Diabetes and Obesity Research Program, University of Helsinki, Finland;Nightingale Health Ltd, Helsinki, Finland

eng

BACKGROUND Both statins and proprotein convertase subtilisin/kexin type 9 (PCSK9) inhibitors lower blood low-density lipoprotein cholesterol levels to reduce risk of cardiovascular events. To assess potential differences between metabolic effects of these 2 lipid-lowering therapies, we performed detailed lipid and metabolite profiling of a large randomized statin trial and compared the results with the effects ofgenetic inhibition of PCSK9, acting as a naturally occurring trial.;METHODS Two hundred twenty-eight circulating metabolic measureswere quantified by nuclear magnetic resonance spectroscopy, including lipoprotein subclass concentrations and their lipid composition, fatty acids, and amino acids, for 5359 individuals (2659 on treatment) in the PROSPER (Prospective Study of Pravastatin in the Elderly at Risk) trial at 6 months postrandomization. The corresponding metabolic measures wereanalyzed in 8 population cohorts (N=72 185) using PCSK9 rs11591147 as an unconfounded proxy to mimic the therapeutic effects of PCSK9 inhibitors.;RESULTS Scaled to an equivalent lowering of low-density lipoproteincholesterol, the effects of genetic inhibition of PCSK9 on 228 metabolic markers were generally consistent with those of statin therapy (R2=0.88). Alterations in lipoprotein lipid composition and fatty acid distribution were similar. However, discrepancies were observed for very-low-density lipoprotein lipid measures. For instance, genetic inhibition of PCSK9 had weaker effects on lowering of very-low-density lipoprotein cholesterol compared with statin therapy (54% versus 77% reduction, relative tothe lowering effect on low-density lipoprotein cholesterol; P=2Ã10-7 for heterogeneity). Genetic inhibition of PCSK9 showed no significant effects on amino acids, ketones, or a marker of inflammation (GlycA), whereas statin treatment weakly lowered GlycA levels.;CONCLUSIONS Genetic inhibition of PCSK9 had similar metabolic effectsto statin therapy on detailed lipid and metabolite profiles. However, PCSK9 inhibitors are predicted to have weaker effects on very-low-density lipoprotein lipids compared with statins for an equivalent lowering of low-density lipoprotein cholesterol, which potentially translate into smaller reductions in cardiovascular disease risk.

Â© 2018 The Authors. Circulation is published on behalf of the American Heart Association, Inc., by Wolters Kluwer Health, Inc. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution, and reproduction in any medium, provided that the original work is properly cited.

D016428 Journal Article

2499â2512

Wellcome Trust United Kingdom;268834 European Research Council International;MC_UU_12013/1 Medical Research Council United Kingdom;MC_UU_12013/5 Medical Research Council United Kingdom

received 2018-03-20;accepted 2018-06-22;pmc-release 2019-11-27;pubmed 2018-12-12 6:0;medline 2018-12-12 6:1;entrez 2018-12-12 6:0

ppublish

pubmed 30525347;doi 10.1161/CIRCULATIONAHA.118.034942;pmc PMC6254781;mid EMS79324

30525347

PubMed-not-MEDLINE

NLM

2018-12-14

Owner:NOTNLM MajorTopic lipoproteins;MajorTopic Mendelian randomization analysis;MajorTopic metabolomics

1524-4539

Electronic

Circulation

Internet

138;22

2018-11-27

United States

Circulation

147763

0009-7322

Metabolomic Consequences of Genetic Inhibition of PCSK9 Compared With Statin Treatment

eng

D016428 Journal Article

2499â2512

received 2018-03-20;accepted 2018-06-22;pmc-release 2019-11-27;pubmed 2018-12-12 6:0;medline 2018-12-12 6:1;entrez 2018-12-12 6:0

ppublish

pubmed 30525347;doi 10.1161/CIRCULATIONAHA.118.034942;pmc PMC6254781;mid EMS79324

30525347

PubMed-not-MEDLINE

NLM

2018-12-11

Owner:NOTNLM MajorTopic lipoproteins;MajorTopic Mendelian randomization analysis;MajorTopic metabolomics

1524-4539

Electronic

Circulation

Internet

138;22

2018-11-27

United States

Circulation

147763

0009-7322

Metabolomic Consequences of Genetic Inhibition of PCSK9 Compared With Statin Treatment

eng

D016428 Journal Article

2499â2512

received 2018-03-20;accepted 2018-06-22;pubmed 2018-12-12 6:0;medline 2018-12-12 6:0;entrez 2018-12-12 6:0

ppublish

pubmed 30525347;doi 10.1161/CIRCULATIONAHA.118.034942

30525347

PubMed-not-MEDLINE

NLM

2018-12-17

Owner:NOTNLM MajorTopic lipoproteins;MajorTopic Mendelian randomization analysis;MajorTopic metabolomics

1524-4539

Electronic

Circulation

Internet

138;22

2018-Nov-27

United States

Circulation

147763

0009-7322

Metabolomic Consequences of Genetic Inhibition of PCSK9 Compared With Statin Treatment

eng

D016428 Journal Article

2499â2512

Wellcome Trust United Kingdom;268834 European Research Council International;MC_UU_12013/1 Medical Research Council United Kingdom;MC_UU_12013/5 Medical Research Council United Kingdom

received 2018-03-20;accepted 2018-06-22;pmc-release 2019-11-27;pubmed 2018-12-12 6:0;medline 2018-12-12 6:1;entrez 2018-12-12 6:0

ppublish

pubmed 30525347;doi 10.1161/CIRCULATIONAHA.118.034942;pmc PMC6254781;mid EMS79324

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